{"id":312,"date":"2026-02-05T15:23:51","date_gmt":"2026-02-05T13:23:51","guid":{"rendered":"https:\/\/sites.uef.fi\/biodiversitygenomics\/?page_id=312"},"modified":"2026-02-05T21:25:54","modified_gmt":"2026-02-05T19:25:54","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en","title":{"rendered":"Publications"},"content":{"rendered":"\n
\"\"
The processes of art and science can resemble each other. Quote by David Lynch.<\/figcaption><\/figure>\n\n\n\n

Some biodiversity genetics related desires for ideas that came to be<\/h2>\n\n\n\n

Reichel, K., Pohjoism\u00e4ki, J., Astrin, J. et al. 2026: From Permits to Samples: Addressing Key Challenges for High-Quality Reference Genome Generation in Europe. Molecular Ecology Resources 26, no. 2: e70100. https:\/\/doi.org\/10.1111\/1755-0998.70100<\/a><\/p>\n\n\n\n

Vihavainen, J., Kiljunen, N., Pohjola, P., McKeown, J., Oinonen, E., Mutanen, M. & Pohjoism\u00e4ki, J.L.<\/strong> 2025: Megabarcoding dark taxa \u2013 Assessing the utility of mass DNA barcoding for phorid fly species discovery. PLOS ONE, 20: e0334948. https:\/\/doi.org\/10.1371\/journal.pone.0334948<\/a><\/p>\n\n\n\n

L\u00f6ytynoja, A., Pohj<\/strong>oism\u00e4ki, J., Valtonen, M., Laakkonen, J., Morita, W., Kunnasranta, M., V\u00e4in\u00f6l\u00e4, R., Olsen, M.T., Auvinen, P. & Jernvall, J. 2025: Deep origins, distinct adaptations, and species-level status indicated for a glacial relict seal. Proceedings of the National Academy of Sciences U. S. A., 122: e2503368122, https:\/\/doi.org\/10.1073\/pnas.2503368122<\/a><\/p>\n\n\n\n

Gaertner, K., Tapanainen, R., Saari, S. Fekete, Z., Goffart, S., Pohjoism\u00e4ki, J.L. & Dufour, E. 2025: Exploring mitonuclear interactions in the regulation of cell physiology: insights from interspecies cybrids. Experimental Cell Research, 446: 114466. https:\/\/doi.org\/10.1016\/j.yexcr.2025.114466<\/a><\/p>\n\n\n\n

Fekete, Z., Absolon, D.E., Michell, C., Wood, J.M., Goffart, S. & Pohjoism\u00e4ki, J.L. <\/strong>2025: Chromosome-level reference genome assembly for the mountain hare (Lepus timidus<\/em>). Peer Community Journal, 5: e14. https:\/\/doi.org\/10.24072\/pcjournal.514<\/a>.<\/p>\n\n\n\n

Gaertner, K., Terzioglu, M., Michell, C., Tapanainen, R., Pohjoism\u00e4ki, J.L., Dufour, E., Saari, S. 2025: Species differences in glycerol-3-phosphate metabolism reveals trade-offs between metabolic adaptations and cell proliferation. Biochimica et Biophysica Acta (BBA) \u2013 Bioenergetics, 1866: 149530. https:\/\/doi.org\/10.1016\/j.bbabio.2024.149530<\/a>.<\/p>\n\n\n\n

Tapanainen, R., Aasumets, K., Fekete, Z., Goffart, S., Dufour, E. & Pohjoism\u00e4ki, J.L. 2024: Species-specific variation in mitochondrial genome tandem repeat polymorphisms in hares (Lepus spp., Lagomorpha, Leporidae) provides insight into their evolution. Gene, 926: 148644. https:\/\/doi.org\/10.1016\/j.gene.2024.148644<\/a><\/p>\n\n\n\n

Michell, C., Collins, J., Laine, P.K., Fekete, Z., Tapanainen, R., Wood, J.M.D., Goffart, S. & Pohjoism\u00e4ki, J.L. 2024: High quality genome assembly of the brown hare (Lepus europaeus<\/em>) with chromosome-level scaffolding. Peer Community Journal, 4: e26. https:\/\/doi.org\/10.24072\/pcjournal.393<\/a><\/p>\n\n\n\n

Gaertner, K., Michell, C., Tapanainen, R., Goffart, S., Saari, S., Soininm\u00e4ki, M., Dufour, E., Pohjoism\u00e4ki, J.L. 2023: Molecular phenotyping uncovers differences in basic housekeeping functions among closely related species of hares (Lepus <\/em>spp., Lagomorpha: Leporidae). Molecular Ecology. 32:4097\u20134117. https:\/\/doi.org\/10.1111\/mec.16755<\/a><\/p>\n\n\n\n

Michell, C. T., Pohjoism\u00e4ki, J.L., Spong, G. & Thulin C.-G. 2022: Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus<\/em>, Nilsson 1831). Scientific Data. 9:667. https:\/\/doi.org\/10.1038\/s41597-022-01794-5<\/a><\/p>\n\n\n\n

Pohjoism\u00e4ki, J.L., Michell, C.T, Lev\u00e4nen, R. & Smith, S. 2021: Hybridization with mountain hares increases the functional allelic repertoire in brown hares. Scientific Reports. 11:15771. doi: 10.1038\/s41598-021-95357-0. <\/p>\n\n\n\n

Lee, K. M., Zeegers, T., Mutanen, M. & Pohjoism\u00e4ki, J.L. 2020: The thin red line between the species \u2013 Genomic dissection of a variable species complex of parasitoid flies Gymnosoma <\/em>(Diptera: Tachinidae). Systematic Entomology.doi: 10.1111\/syen.12450.<\/p>\n","protected":false},"excerpt":{"rendered":"

Some biodiversity genetics related desires for ideas that came to be Reichel, K., Pohjoism\u00e4ki, J., Astrin, J. et al. 2026: From Permits to Samples: Addressing Key Challenges for High-Quality Reference Genome Generation in Europe. Molecular Ecology Resources 26, no. 2: e70100. https:\/\/doi.org\/10.1111\/1755-0998.70100 Vihavainen, J., Kiljunen, N., Pohjola, P., McKeown, J., Oinonen, E., Mutanen, M. & Pohjoism\u00e4ki, J.L. 2025: Megabarcoding dark […]<\/p>\n","protected":false},"author":1000,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-312","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\nPublications - UEF Biodiversiteettigenetiikka<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"fi_FI\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - UEF Biodiversiteettigenetiikka\" \/>\n<meta property=\"og:description\" content=\"Some biodiversity genetics related desires for ideas that came to be Reichel, K., Pohjoism\u00e4ki, J., Astrin, J. et al. 2026: From Permits to Samples: Addressing Key Challenges for High-Quality Reference Genome Generation in Europe. Molecular Ecology Resources 26, no. 2: e70100. https:\/\/doi.org\/10.1111\/1755-0998.70100 Vihavainen, J., Kiljunen, N., Pohjola, P., McKeown, J., Oinonen, E., Mutanen, M. & Pohjoism\u00e4ki, J.L. 2025: Megabarcoding dark […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en\" \/>\n<meta property=\"og:site_name\" content=\"UEF Biodiversiteettigenetiikka\" \/>\n<meta property=\"article:modified_time\" content=\"2026-02-05T19:25:54+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/sites.uef.fi\/biodiversitygenomics\/wp-content\/uploads\/sites\/569\/2026\/02\/IMG_0509-1-scaled.jpeg\" \/>\n\t<meta property=\"og:image:width\" content=\"2560\" \/>\n\t<meta property=\"og:image:height\" content=\"1507\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/jpeg\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Arvioitu lukuaika\" \/>\n\t<meta name=\"twitter:data1\" content=\"3 minuuttia\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en\",\"url\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en\",\"name\":\"Publications - UEF Biodiversiteettigenetiikka\",\"isPartOf\":{\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/#website\"},\"primaryImageOfPage\":{\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en#primaryimage\"},\"image\":{\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en#primaryimage\"},\"thumbnailUrl\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/wp-content\/uploads\/sites\/569\/2026\/02\/IMG_0509-1-1024x603.jpeg\",\"datePublished\":\"2026-02-05T13:23:51+00:00\",\"dateModified\":\"2026-02-05T19:25:54+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en#breadcrumb\"},\"inLanguage\":\"fi\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en\"]}]},{\"@type\":\"ImageObject\",\"inLanguage\":\"fi\",\"@id\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/publications\/?lang=en#primaryimage\",\"url\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/wp-content\/uploads\/sites\/569\/2026\/02\/IMG_0509-1-scaled.jpeg\",\"contentUrl\":\"https:\/\/sites.uef.fi\/biodiversitygenomics\/wp-content\/uploads\/sites\/569\/2026\/02\/IMG_0509-1-scaled.jpeg\",\"width\":2560,\"height\":1507,\"caption\":\"The processes of art and science can resemble each other. 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