{"id":312,"date":"2020-07-09T13:38:07","date_gmt":"2020-07-09T10:38:07","guid":{"rendered":"https:\/\/sites.uef.fi\/biophysics\/?page_id=312"},"modified":"2025-08-19T19:09:07","modified_gmt":"2025-08-19T16:09:07","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.uef.fi\/biophysics\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n<h2 class=\"wp-block-heading\"><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=%28%28%28%28Jurvelin+J%5BAuthor%5D+NOT+%28%E2%80%9Cspleen%E2%80%9D+OR+%E2%80%9Cliver%E2%80%9D%29%29+OR+Julkunen+P%5BAuthor%5D+NOT+%28%22transcranial%22+OR+%22TMS%22+OR+%E2%80%9Cliver%E2%80%9D%29%29OR+Korhonen+RK%5BAuthor%5D+OR+%28T%C3%B6yr%C3%A4s+J%5BAuthor%5D+NOT+Lepp%C3%A4nen+T%5BAuthor%5D%29+OR+Nissi+M%5BAuthor%5D+OR+Afara+I%5BAuthor%5D+OR+Mononen+Mika+E%5BAuthor%5D+OR+M%C3%A4kel%C3%A4+Janne+T%5BAuthor%5D+OR+Tanska+Petri%5BAuthor%5D+OR+Turunen+Mikael+J%5BAuthor%5D+OR+Stenroth+Lauri%5BAuthor%5D%29+AND+%28%221980%2F01%2F01%22%5BDate+-+Entrez%5D+%3A+%223000%2F01%2F01%22%5BDate+-+Entrez%5D%29%29&amp;sort=date\" target=\"_blank\" rel=\"noreferrer noopener\">The most recent publications<\/a> from the Biophysics research group (PubMed)<\/h2>\n\n\n\n<div class=\"wp-block-group is-layout-flow wp-block-group-is-layout-flow\">\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:100%\">\n<div class=\"wp-block-group is-layout-flow wp-block-group-is-layout-flow\"><ul class=\"has-dates has-authors wp-block-rss\"><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41903277\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Viscoelastic properties of anterolateral and posteromedial bundles of the posterior cruciate ligament change in osteoarthritic human knee joints<\/a><\/div><time datetime=\"2026-03-28T13:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">March 28, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Aapo Ristaniemi<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41895205\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Visibility and relaxation time mapping of 3-D printed polymers using ultrashort echo time MRI<\/a><\/div><time datetime=\"2026-03-27T13:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">March 27, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Teemu V Tuomainen<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41882935\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Clinical Feasibility of Deep Learning Contrast Synthesis From MR Fingerprinting in Knee Osteoarthritis<\/a><\/div><time datetime=\"2026-03-26T13:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">March 26, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Mika T Nevalainen<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41877230\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Mechanics-based estimation of metabolic cost of locomotion in rehabilitation: A narrative review<\/a><\/div><time datetime=\"2026-03-25T13:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">March 25, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Dezhi Jiang<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41807652\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Exploring mechanisms governing cartilage interstitial fluid load support in lubrication through experimental and computational analysis<\/a><\/div><time datetime=\"2026-03-11T13:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">March 11, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Janne T A M\u00e4kel\u00e4<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41717536\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>An open-source JavaScript clinical neurophysiology library for education and clinical research<\/a><\/div><time datetime=\"2026-02-20T14:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">February 20, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Sampsa Lohi<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41557741\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>MMP release following cartilage injury leads to collagen loss in intact tissue: A computational study<\/a><\/div><time datetime=\"2026-01-20T14:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">January 20, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Moustafa Hamada<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41534877\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Ultrasmall Surface-Charge-Modified Tantalum Oxide Nanoparticles for the Assessment of Articular Cartilage Using Contrast-Enhanced Computed Tomography<\/a><\/div><time datetime=\"2026-01-14T14:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">January 14, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Jiri J\u00e4ntti<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41511197\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>External clinical audits in clinical radiology in Finland<\/a><\/div><time datetime=\"2026-01-09T14:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">January 9, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Petro Julkunen<\/span><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubmed.ncbi.nlm.nih.gov\/41486476\/?utm_source=WordPress&#038;utm_medium=rss&#038;utm_campaign=None&#038;utm_content=1-_PV-NYr617GwbK5GNXtv1N8SecQ6fNiT3_wle_qRcvbkXgiF&#038;fc=None&#038;ff=20260421055900&#038;v=2.19.0.post6+133c1fe'>Bio-Compositional and Microstructural Changes in Rabbit Knee Collateral Ligaments Eight Weeks After Anterior Cruciate Ligament Transection<\/a><\/div><time datetime=\"2026-01-05T14:00:00+02:00\" class=\"wp-block-rss__item-publish-date\">January 5, 2026<\/time> <span class=\"wp-block-rss__item-author\">by Anahita Gheisari<\/span><\/li><\/ul><\/div>\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<h2 class=\"wp-block-heading\">Doctoral dissertations<\/h2>\n\n\n<p><strong>Jukka Jurvelin<\/strong><br \/>Biomechanical Properties of the Knee Articular Cartilage Under Various Loading Conditions<\/p>\n<p><strong>Tiina Lyyra<\/strong><br \/>Development, Validation and Clinical Application of Indentation Technique for Arthroscopic Measurement of Cartilage Stiffness<\/p>\n<p><strong>Juha T\u00f6yr\u00e4s<\/strong><br \/>Mechano-Acoustic Characterization of Articular Cartilage and Trabecular Bone<\/p>\n<p><strong>Miika Nieminen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_951-781-241-8\/urn_isbn_951-781-241-8.pdf\">Quantitative Magnetic Resonance Imaging of Articular Cartilage<\/a><\/p>\n<p><strong>Mikko Laasanen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_951-781-257-4\/urn_isbn_951-781-257-4.pdf\">Development and Validation of Mechano-Acoustic Techniques and Instrument for Evaluation of Articular Cartilage<\/a><\/p>\n<p><strong>Rami Korhonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_951-781-301-5\/urn_isbn_951-781-301-5.pdf\">Experimental Analysis and Finite Element Modeling of Normal and Degraded Articular Cartilage<\/a><\/p>\n<p><strong>Mikko Hakulinen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_951-27-0450-1\/urn_isbn_951-27-0450-1.pdf\">Prediction of Density, Structure and Mechanical Properties of Trabecular Bone Using Ultrasound and X-ray Techniques<\/a><\/p>\n<p><strong>Simo Saarakkala<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-0458-3\/urn_isbn_978-951-27-0458-3.pdf\">Pre-Clinical Ultrasound Diagnostics of Articular Cartilage and Subchondral Bone<\/a><\/p>\n<p><strong>Heikki Nieminen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-0784-3\/urn_isbn_978-951-27-0784-3.pdf\">Acoustic Properties of Articular Cartilage<\/a><\/p>\n<p><strong>Eveliina Lammentausta<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-0789-8\/urn_isbn_978-951-27-0789-8.pdf\">Structural and Mechanical Characterization of Articular Cartilage and Trabecular Bone with Quantitative NMR<\/a><\/p>\n<p><strong>Chengjuan Qu<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-0756-0\/urn_isbn_978-951-27-0756-0.pdf\">Articular Cartilage Proteoglycan Biosynthesis and Sulfation<\/a><\/p>\n<p><strong>Joanna Sierpowska<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-0787-4\/urn_isbn_978-951-27-0787-4.pdf\">Electrical and Dielectric Characterization of Trabecular Bone Quality<\/a><\/p>\n<p><strong>Jatta Berberat n\u00e9e Kurkij\u00e4rvi<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1092-8\/urn_isbn_978-951-27-1092-8.pdf\">Quantitative Magnetic Resonance Imaging of Native and Repaired Articular Cartilage<\/a><\/p>\n<p><strong>Mikko Nissi<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1085-0\/urn_isbn_978-951-27-1085-0.pdf\">Magnetic Resonance Parameters in Quantitative Evaluation of Articular Cartilage<\/a><\/p>\n<p><strong>Petro Julkunen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1088-1\/urn_isbn_978-951-27-1088-1.pdf\">Relationships between Structure, Composition and Function of Articular Cartilage<\/a><\/p>\n<p><strong>Ossi Riekkinen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1097-3\/urn_isbn_978-951-27-1097-3.pdf\">Development and Application of Ultrasound Backscatter Methods for the Diagnostics of Trabecular Bone<\/a><\/p>\n<p><strong>Panu Kiviranta<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1211-3\/urn_isbn_978-951-27-1211-3.pdf\">Novel Quantitative Methods for the Diagnosis of Cartilage Degeneration<\/a><\/p>\n<p><strong>Pekka Tiihonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1294-6\/urn_isbn_978-951-27-1294-6.pdf\">Novel Portable Devices for Recording Sleep Apnea and Evaluating Altered Consciousness<\/a><\/p>\n<p><strong>Erna Kaleva<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-951-27-1461-2\/urn_isbn_978-951-27-1461-2.pdf\">Optimization of Quantitative High-Frequency Ultrasound Imaging of Articular Cartilage<\/a><\/p>\n<p><strong>Jarno Rieppo<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0356-3\/urn_isbn_978-952-61-0356-3.pdf\">Microscopic and Spectroscopic Analysis of Immature and Mature Articular Cartilage<\/a><\/p>\n<p><strong>Antti Aula n\u00e9 Kallioniemi<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0367-9\/urn_isbn_978-952-61-0367-9.pdf\">Computed Tomography and Ultrasound Methods for Simultaneous Evaluation of Articular Cartilage and Subchondral Bone<\/a><\/p>\n<p><strong>Janne Karjalainen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0475-1\/urn_isbn_978-952-61-0475-1.pdf\">Novel Pulse-Echo Ultrasound Methods for Diagnostics of Osteoporosis<\/a><\/p>\n<p><strong>Tuomas Vir\u00e9n<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0471-3\/urn_isbn_978-952-61-0471-3.pdf\">Arthroscopic Ultrasound Imaging of Articular Cartilage<\/a><\/p>\n<p><strong>Harri Kokkonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0970-1\/urn_isbn_978-952-61-0970-1.pdf\">Development and Evaluation of Delayed CT Arthrography of Cartilage<\/a><\/p>\n<p><strong>Lassi Rieppo<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0964-0\/urn_isbn_978-952-61-0964-0.pdf\">Infrared Spectroscopic Characterization of Articular Cartilage<\/a><\/p>\n<p><strong>Mika Mononen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1038-7\/urn_isbn_978-952-61-1038-7.pdf\">Computational Modeling of Knee Joint Mechanics Under Impact and Gait Cycle Loading<\/a><\/p>\n<p><strong>Siru Turunen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1089-9\/urn_isbn_978-952-61-1089-9.pdf\">Osmotic and Mechanical Loading of Chondrocytes in Situ: Effect of the Extracellular and Pericellular Matrix on Cell Volume and Morphology<\/a><\/p>\n<p><strong>Katariina Nissinen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1159-9\/urn_isbn_978-952-61-1159-9.pdf\">Diffusion of X-ray Contrast Agents in Intact and Repaired Articular Cartilage<\/a><\/p>\n<p><strong>Mikael Turunen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1195-7\/urn_isbn_978-952-61-1195-7.pdf\">Spectroscopic Characterization of Bone Composition<\/a><\/p>\n<p><strong>Jussi Kinnunen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-0908-4\/urn_isbn_978-952-61-0908-4.pdf\">Reflectance and fluorescence analysis of articular cartilage<\/a><\/p>\n<p><strong>Inari Tamminen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1144-5\/urn_isbn_978-952-61-1144-5.pdf\">Assessment of Bone Quality in Pediatric and Adult Patients with Osteoporosis<\/a><\/p>\n<p><strong>Cristina Florea<\/strong><br \/>Characterization of articular cartilage, chondrocyte and bone properties using nano- and microscale techniques<\/p>\n<p><strong>Yevgeniya Kobrina<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1458-3\/urn_isbn_978-952-61-1458-3.pdf\">Infrared Microspectroscopic Cluster Analysis of Bone and Cartilage<\/a><\/p>\n<p><strong>Jarkko Iivarinen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1492-7\/urn_isbn_978-952-61-1492-7.pdf\">Diagnostics of human forearm soft tissues using indentation and suction measurements<\/a><\/p>\n<p><strong>Markus Malo<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1531-3\/urn_isbn_978-952-61-1531-3.pdf\">Quantitative Characterization of Proximal Femur Using Pulse-Echo Ultrasound Measurements<\/a><\/p>\n<p><strong>Sami V\u00e4\u00e4n\u00e4nen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1537-5\/urn_isbn_978-952-61-1537-5.pdf\">Functional imaging of proximal femur by combining dual energy X-ray imaging and finite element simulations<\/a><\/p>\n<p><strong>Jari Rautiainen<\/strong><br \/><a href=\"http:\/\/jultika.oulu.fi\/files\/isbn9789526207643.pdf\">Novel Magnetic Resonance Imaging Techniques for Articular Cartilage and Subchondral Bone<\/a><\/p>\n<p><strong>Jukka Liukkonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1757-7\/urn_isbn_978-952-61-1757-7.pdf\">Ultrasound Arthroscopy of Articular Cartilage and Subchondral Bone<\/a><\/p>\n<p><strong>Kimmo Halonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1884-0\/urn_isbn_978-952-61-1884-0.pdf\">Validation and application of computational knee joint models<\/a><\/p>\n<p><strong>Roope Lasanen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1880-2\/urn_isbn_978-952-61-1880-2.pdf\">Infrared thermography in the evaluation of skin temperature<\/a><\/p>\n<p><strong>Tuomo Silvast<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-1914-4\/urn_isbn_978-952-61-1914-4.pdf\">Contrast enhanced computed tomography of articular cartilage<\/a><\/p>\n<p><strong>Pia Puhakka<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2020-1\/urn_isbn_978-952-61-2020-1.pdf\">Optical Coherence Tomography of Articular Cartilage<\/a><\/p>\n<p><strong>Janne M\u00e4kel\u00e4<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2029-4\/urn_isbn_978-952-61-2029-4.pdf\">Structural and Functional Alterations of Articular Cartilage in Osteoarthritis<\/a><\/p>\n<p><strong>Lasse R\u00e4s\u00e4nen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2147-5\/urn_isbn_978-952-61-2147-5.pdf\">Functional MR Imaging and Biomechanical Modeling of The Knee<\/a><\/p>\n<p><strong>Juuso Honkanen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2157-4\/urn_isbn_978-952-61-2157-4.pdf\">Computed Tomography of Cartilage and Meniscus Using Anionic and Cationic Contrast Agents<\/a><\/p>\n<p><strong>Petri Tanska<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2178-9\/urn_isbn_978-952-61-2178-9.pdf\">Cell-tissue interactions and adaptation in cartilage: computational modeling of knee joint disorders<\/a><\/p>\n<p><strong>Elvis Danso<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2202-1\/urn_isbn_978-952-61-2202-1.pdf\">Structure and function of knee joint meniscus: experimental and computational analyses<\/a><\/p>\n<p><strong>Chibuzor Eneh<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2225-0\/urn_isbn_978-952-61-2225-0.pdf\">Pulse-echo ultrasound assessment of cortical bone thickness and porosity<\/a><\/p>\n<p><strong>Satu Inkinen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2468-1\/urn_isbn_978-952-61-2468-1.pdf\">Ultrasound backscattering in articular cartilage: experimental and finite difference time domain simulation studies of ultrasound backscatter arising from chondrocytes and collagen<\/a><\/p>\n<p><strong>Xiaoyu Tong<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2495-7\/urn_isbn_978-952-61-2495-7.pdf\">Cortical bone histomorphometry: microarchitectural heterogeneity across anatomical sites in healthy males<\/a><\/p>\n<p><strong>Mikko Ven\u00e4l\u00e4inen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2509-1\/urn_isbn_978-952-61-2509-1.pdf\">Computational modeling of knee joint function based on CT arthrography<\/a><\/p>\n<p><strong>Xiaowei Ojanen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2535-0\/urn_isbn_978-952-61-2535-0.pdf\">Relationships of microstructure and composition with material and macro level viscoelastic properties of trabecular bone<\/a><\/p>\n<p><strong>Mari Huttu<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2590-9\/urn_isbn_978-952-61-2590-9.pdf\">Cell tissue interactions in normal, aging and osteoarthritic articular cartilage<\/a><\/p>\n<p><strong>Olesya Klets<\/strong><br \/><a href=\"http:\/\/jultika.oulu.fi\/files\/isbn9789526218175.pdf\">Subject-specific finite element modeling of the knee joint to study osteoarthritis development and progression<\/a><\/p>\n<p><strong>Ari Ronkainen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2814-6\/urn_isbn_978-952-61-2814-6.pdf\">Biomechanical responses of chondrocytes in healthy and meniscectomized rabbit knee joints<\/a><\/p>\n<p><strong>Jaakko Sarin<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-2910-5\/urn_isbn_978-952-61-2910-5.pdf\">Evaluation of chondral injuries using near infrared spectroscopy<\/a><\/p>\n<p><strong>Mimmi Liukkonen<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-3043-9\/urn_isbn_978-952-61-3043-9.pdf\">Predicting knee osteoarthritis: development and application of segmentation and finite element modelling methods<\/a><\/p>\n<p><strong>Mithilesh Prakash<\/strong><br \/><a href=\"http:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-3161-0\/urn_isbn_978-952-61-3161-0.pdf\">Optimization of multivariate regression techniques for near-infrared spectroscopic characterization of articular cartilage<\/a><\/p>\n<p><strong>Katariina Myller<\/strong><br \/><a href=\"https:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-3253-2\/urn_isbn_978-952-61-3253-2.pdf\">Quantitative contrast-enhanced computed tomography of the knee joint: from segmentation of articular cartilages to computational modelling of injuries<\/a><\/p>\n<p><strong>Gustavo Orozco<\/strong><br \/><a href=\"https:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-3391-1\/urn_isbn_978-952-61-3391-1.pdf\">Mechanobiological modeling of articular cartilage: predicting post-traumatic knee osteoarthritis<\/a><\/p>\n<p><strong>Aapo Ristaniemi<\/strong><br \/><a href=\"https:\/\/epublications.uef.fi\/pub\/urn_isbn_978-952-61-3410-9\/urn_isbn_978-952-61-3410-9.pdf\">Structure and function of knee ligaments and patellar tendon: Biomechanics, biochemistry and computational modeling<\/a><\/p>\n<p><strong>Olli Nyk\u00e4nen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/bitstream\/handle\/123456789\/23490\/urn_isbn_978-952-61-3449-9.pdf?sequence=1&amp;isAllowed=y\">Magnetic resonance imaging of the osteochondral unit : studies using quantitative susceptibility mapping and SWeep Imaging with Fourier Transform<\/a><\/p>\n<p><strong>Abhisek Bhattarai<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/bitstream\/handle\/123456789\/23538\/urn_isbn_978-952-61-3577-9.pdf?sequence=1&amp;isAllowed=y\">Novel dual-contrast computed tomography technique for detection of cartilage injuries<\/a><\/p>\n<p><strong>Jari Torniainen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/bitstream\/handle\/123456789\/23644\/urn_isbn_978-952-61-3598-4.pdf?sequence=1&amp;isAllowed=y\">Near infrared spectroscopy-based evaluation of patellar tendon and knee ligaments<\/a><\/p>\n<p><strong>Paul Bolcos<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/bitstream\/handle\/123456789\/24470\/161285707447615338.pdf?sequence=1&amp;isAllowed=y\">Finite element modeling of anterior cruciate ligament reconstructed knee joints : toward clinical use via fast motion implementation and verification against MRI follow-up<\/a><\/p>\n<p><strong>Annina Saukko<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/25956?locale-attribute=en\">Triple Contrast Method for Computed Tomography Diagnostics of Cartilage Injuries<\/a><\/p>\n<p><strong>Amir Esrafilian<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/25988\">Multiscale computational modeling of the knee joint: Development, validation, and application of musculoskeletal finite element modeling methods<\/a><\/p>\n<p><strong>Lingwei Huang<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/26492\">Bone, cartilage and their interface : Osteochondral changes during very early osteoarthritis<\/a><\/p>\n<p><strong>Shohreh Kariminezhad<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/26528\">Repetition suppression, a potential biomarker for neuromodulation-induced plasticity<\/a><\/p>\n<p><strong>Jusa Reijonen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/27129\">Computational methods for advancing clinical applications of transcranial magnetic stimulation<\/a><\/p>\n<p><strong>Atte Eskelinen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/27317\">Biomechanics and inflammation \u2013 Regulators of articular cartilage degradation: Models aiming towards comprehensive prediction of post-traumatic osteoarthritis progression<\/a><\/p>\n<p><strong>Simo Ojanen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/27457?locale-attribute=en\">Multiscale imaging and biomechanics of articular cartilage in an animal model of osteoarthritis<\/a><\/p>\n<p><strong>Miitu Honkanen<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/28079\">Dual Energy Triple Contrast Computed Tomography of Articular Cartilage<\/a><\/p>\n<p><strong>Nina H\u00e4nninen<\/strong><br \/><a href=\"http:\/\/jultika.oulu.fi\/Record\/isbn978-952-62-3413-7\">Relaxation anisotropy of quantitative MRI parameters in biological tissues<\/a><\/p>\n<p><strong>Mohammedhossein Ebrahimi<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/28588\">Structure, composition and function of human tibiofemoral joint cartilage: experimental and computational analysis of healthy and osteoarthritic tissue<\/a><\/p>\n<p><strong>Ali Mohammadi<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/28654\">Characterization, imaging and computational modeling of joint and articular cartilage injuries<\/a><\/p>\n<p><strong>Adam Kositsky<\/strong><br \/><a href=\"https:\/\/erepo.uef.fi\/handle\/123456789\/29252\">Semitendinosus structure and function in healthy and anterior cruciate ligament reconstructed individuals<\/a><\/p>\n<p><strong>Heta Orava<br \/><\/strong><a href=\"https:\/\/dspace.uef.fi\/handle\/123456789\/31789\">Computed tomography imaging and functional in silico modelling of cartilage, bone and tissue engineered cartilage constructs<\/a><\/p>\n<p><strong>Alexander Paz Carvajal<br \/><\/strong><a href=\"https:\/\/dspace.uef.fi\/handle\/123456789\/31985\">Novel methodologies for generation and simulation of knee joint finite element models: Towards a template-based and neural network-assisted model for rapid prediction of knee osteoarthritis<\/a><strong><br \/><\/strong><\/p>\n<p><strong>Jere Lavikainen<br \/><\/strong><a href=\"https:\/\/dspace.uef.fi\/handle\/123456789\/32885\">Estimation methods for musculoskeletal movement and loading using biomechanical models and portable modalities: Bringing modern musculoskeletal analysis methods outside the motion laboratory<\/a><\/p>\n<p><strong>Swetha Pala<br \/><\/strong><a href=\"https:\/\/dspace.uef.fi\/handle\/123456789\/32922\">Magnetic resonance imaging of articular cartilage in osteoarthritis: Studies on robustness and acceleration of quantitative imaging<\/a><\/p>\n<p><strong>Kalle Karjalainen<br \/><\/strong><a href=\"https:\/\/dspace.uef.fi\/handle\/123456789\/33033\">Imaging, biology and biomechanics of rat knee joint cartilage in post-traumatic and metabolic subtypes of osteoarthritis<\/a><\/p>\n<p><strong>Sana Jahangir<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/4b22b829-556a-46be-93e5-bcde6a8e7a3e\">Imaging-based computational modelling of knee joint mechanics: radiograph-informed model generation and simulation of the sensitivity of the selected model parameters on cartilage mechanics<\/a><\/p>\n<p><strong>Awuniji Linus<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/30cc9d6e-98a6-4826-9a8d-640fd2317781\">Infrared spectroscopic and biomechanical characterization of human articular cartilage and chondrocyte microenvironment<\/a><\/p>\n<p><strong>Antti Aarnio<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/827f21ce-920d-43b1-bee7-4619e6a56819\">Advanced image reconstruction methods for quantitative magnetic resonance imaging<\/a><\/p>\n<p><strong>Iman Kafian-Attari<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/6451b1f2-26e1-4d99-8970-c2aa1826854f\">Shedding Light on Articular Cartilage: A Comprehensive Analysis of Light Propagation and Its relationship with Tissue Structure and Biomechanics in Articular Cartilage<\/a><\/p>\n<p><strong>Bilour Khan<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/371f01a1-3a77-453d-b5d0-ec09e0cabb58\">Articular cartilage optical properties vary with tissue depth and integrity<\/a><\/p>\n<p><strong>Joonas Kosonen<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/1798973e-8b3b-44ef-9bd0-c78e3efaa045\">Cell-driven in silico modeling of post-traumatic osteoarthritis: Impact of Overloading, Inflammation, and Antioxidant Treatment on articular cartilage composition<\/a><\/p>\n<p><strong>Petri Paakkari<br \/><\/strong><a href=\"https:\/\/erepo.uef.fi\/items\/b066d891-3577-40eb-91ec-03f932baa0e8\">Contrast-enhanced photon-counting computed tomography technique for quantifying articular cartilage composition<\/a><\/p>\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>The most recent publications from the Biophysics research group (PubMed) Doctoral dissertations Jukka JurvelinBiomechanical Properties of the Knee Articular Cartilage Under Various Loading Conditions Tiina LyyraDevelopment, Validation and Clinical Application of Indentation Technique for Arthroscopic Measurement of Cartilage Stiffness Juha T\u00f6yr\u00e4sMechano-Acoustic Characterization of Articular Cartilage and Trabecular Bone Miika NieminenQuantitative Magnetic Resonance Imaging of Articular [&hellip;]<\/p>\n","protected":false},"author":631,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-312","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Publications - Biophysics Research Group<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/biophysics\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - 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