{"id":56,"date":"2020-10-08T12:35:07","date_gmt":"2020-10-08T09:35:07","guid":{"rendered":"https:\/\/sites.uef.fi\/cancer-stress-biology-latonen\/?page_id=56"},"modified":"2025-07-23T13:28:23","modified_gmt":"2025-07-23T10:28:23","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.uef.fi\/cancer-stress-biology-latonen\/frontpage\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Up to date lists:
\nPubMed-listed publications can be found here<\/strong>.<\/a>
\nThe rest of the published work, including technical proceedings, can be found through Google Scholar<\/a><\/strong>.<\/p>\n

Latonen et al. 2024 Trends in Biotechnology<\/a>: Virtual staining for histology by deep learning.
\nBatnasan et al. 2024\u00a0Cancer Cell International<\/a>: Platinum-based drugs induce phenotypic alterations in nucleoli and Cajal bodies in prostate cancer cells.
\n<\/strong>Ruusuvuori et al.<\/em> 2023 Cancer Cell<\/a>: Deep learning transforms colorectal cancer biomarker prediction from histopathology images.
\nAikio et al.<\/em> 2023 Cancer Reports<\/a>: Complementary analysis of proteome-wide proteomics reveals changes in RNA binding protein-profiles during prostate cancer progression.
\nKhan et al. 2023 Patterns<\/a>: The effect of neural network architecture on virtual H&E staining: Systematic assessment of histological feasibility.
\nKoivukoski et al.<\/em> 2023 Laboratory Investigation<\/a>: Unstained Tissue Imaging and Virtual Hematoxylin and Eosin Staining of Histologic Whole Slide Images.
\nHonkamaa et al.<\/em> 2023 Medical Image Analysis<\/a>: Deformation equivariant cross-modality image synthesis with paired non-aligned training data.
\nSattari et al<\/em>. 2023 Endocrine-Related Cancer:<\/a> Identification of long noncoding RNAs with aberrant expression in prostate cancer metastases.
\nWeitz et al.<\/em> 2023 Scientific Data<\/a>: A Multi-Stain Breast Cancer Histological Whole-Slide-Image Data Set from Routine Diagnostics.
\nKukkonen et al.<\/em> 2022 Endocrine Related Cancer<\/a>: Nonmalignant AR-positive prostate epithelial cells and cancer cells respond differently to androgen.
\nScaravilli et al.<\/em> 2022 Oncogenesis<\/a>: miR-32 promotes MYC-driven prostate cancer.
\nRuusuvuori et al.<\/em> 2022 Heliyon<\/a>: Spatial analysis of histology in 3D: quantification and visualization of organ and tumor level tissue environment.
\nBatnasan et al. 2022 Results Probl Cell Differ:<\/a> Nuclear Organization in Response to Stress: A Special Focus on Nucleoli.
\nSchirmer et al. 2022 Front. Cell Devl Biol<\/a>: Nuclear size rectification: A potential new therapeutic approach to reduce metastasis in cancer.
\nTollis et al. 2022 ACS Chemical Biology<\/a>: Chemical Interrogation of Nuclear Size Identifies Compounds with Cancer Cell Line-Specific Effects on Migration and Invasion.
\nLatonen and Ruusuvuori, 2021 European Journal of Cancer<\/a>: Building a central repository landmarks a new era for AI-assisted digital pathology development in Europe.
\nLiimatainen et al.<\/em> 2021 BMC Cancer<\/a>: Virtual reality for 3D histology: multi-scale visualization of organs with interactive feature exploration.
\nSadeesh\u00a0et al.<\/em>\u00a02021 Cancers<\/a>: Proteomic Landscape of Prostate Cancer: The View Provided by Quantitative Proteomics, Integrative Analyses, and Protein Interactomes.
\nRintala et al<\/em>. 2021 Brief Bioinform<\/a>: A systematic comparison of data- and knowledge-driven approaches to disease subtype discovery.
\nEerola et al<\/em>. 2021 Cancer Med<\/a>: Expression and ERG regulation of PIM kinases in prostate cancer.
\nScaravilli\u00a0et al.<\/em>\u00a02021 Front. Cell Dev. Biol:<\/a>\u00a0Androgen-Driven Fusion Genes and Chimeric Transcripts in Prostate Cancer.
\nLiimatainen\u00a0et al.<\/em>\u00a02021 Biomolecules<\/a>: Convolutional Neural Network-Based Artificial Intelligence for Classification of Protein Localization Patterns.<\/p>\n","protected":false},"excerpt":{"rendered":"

Up to date lists: PubMed-listed publications can be found here. The rest of the published work, including technical proceedings, can be found through Google Scholar. Latonen et al. 2024 Trends in Biotechnology: Virtual staining for histology by deep learning. Batnasan et al. 2024\u00a0Cancer Cell International: Platinum-based drugs induce phenotypic alterations in nucleoli and Cajal bodies […]<\/p>\n","protected":false},"author":323,"featured_media":0,"parent":31,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-56","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\nPublications - Latonen Cancer Stress Biology<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/cancer-stress-biology-latonen\/frontpage\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - Latonen Cancer Stress Biology\" \/>\n<meta property=\"og:description\" content=\"Up to date lists: PubMed-listed publications can be found here. The rest of the published work, including technical proceedings, can be found through Google Scholar. Latonen et al. 2024 Trends in Biotechnology: Virtual staining for histology by deep learning. Batnasan et al. 2024\u00a0Cancer Cell International: Platinum-based drugs induce phenotypic alterations in nucleoli and Cajal bodies […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.uef.fi\/cancer-stress-biology-latonen\/frontpage\/publications\/\" \/>\n<meta property=\"og:site_name\" content=\"Latonen Cancer Stress Biology\" \/>\n<meta property=\"article:modified_time\" content=\"2025-07-23T10:28:23+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"2 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/frontpage\\\/publications\\\/\",\"url\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/frontpage\\\/publications\\\/\",\"name\":\"Publications - Latonen Cancer Stress Biology\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/#website\"},\"datePublished\":\"2020-10-08T09:35:07+00:00\",\"dateModified\":\"2025-07-23T10:28:23+00:00\",\"breadcrumb\":{\"@id\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/frontpage\\\/publications\\\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/frontpage\\\/publications\\\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/frontpage\\\/publications\\\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Frontpage\",\"item\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Publications\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/#website\",\"url\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/\",\"name\":\"Latonen Cancer Stress Biology\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\\\/\\\/sites.uef.fi\\\/cancer-stress-biology-latonen\\\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Publications - Latonen Cancer Stress Biology","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/sites.uef.fi\/cancer-stress-biology-latonen\/frontpage\/publications\/","og_locale":"en_US","og_type":"article","og_title":"Publications - Latonen Cancer Stress Biology","og_description":"Up to date lists: PubMed-listed publications can be found here. 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