Official repository of MedicDeepLabv3+<\/a><\/p>\n<\/div>\nMedicDeepLabv3+ is a convolutional neural network based on DeepLabv3+ implemented in Python and Pytorch to extract the brain mask and the contralateral hemisphere of rodent MRI brain scans with lesions. The code of MedicDeepLabv3+ is simplified to make it readable and accessible to a wide audience.<\/p>\n
DOI: 10.5281\/zenodo.4009212.svg<\/p>\n
<\/p>\n","protected":false},"excerpt":{"rendered":"
Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]<\/p>\n","protected":false},"author":162,"featured_media":0,"parent":21,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-646","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\n
Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"og:description\" content=\"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:site_name\" content=\"Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"article:modified_time\" content=\"2023-03-07T13:26:19+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"name\":\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"isPartOf\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\"},\"datePublished\":\"2023-03-07T13:25:46+00:00\",\"dateModified\":\"2023-03-07T13:26:19+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"GenomMed home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Datasets and Software\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/\",\"name\":\"Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/sites.uef.fi\/genommed\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","og_locale":"en_US","og_type":"article","og_title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","og_description":"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]","og_url":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","og_site_name":"Genetics and Mechanisms in Translational Medicine Doctoral programme","article_modified_time":"2023-03-07T13:26:19+00:00","twitter_card":"summary_large_image","twitter_misc":{"Est. reading time":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","url":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","name":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","isPartOf":{"@id":"https:\/\/sites.uef.fi\/genommed\/#website"},"datePublished":"2023-03-07T13:25:46+00:00","dateModified":"2023-03-07T13:26:19+00:00","breadcrumb":{"@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/sites.uef.fi\/genommed\/"},{"@type":"ListItem","position":2,"name":"GenomMed home","item":"https:\/\/sites.uef.fi\/genommed\/"},{"@type":"ListItem","position":3,"name":"Datasets and Software"}]},{"@type":"WebSite","@id":"https:\/\/sites.uef.fi\/genommed\/#website","url":"https:\/\/sites.uef.fi\/genommed\/","name":"Genetics and Mechanisms in Translational Medicine Doctoral programme","description":"","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/sites.uef.fi\/genommed\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-US"}]}},"_links":{"self":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/users\/162"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/comments?post=646"}],"version-history":[{"count":2,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646\/revisions"}],"predecessor-version":[{"id":652,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646\/revisions\/652"}],"up":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/21"}],"wp:attachment":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/media?parent=646"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}![Confocal microscopy images of fibrin bead assay<\/a>.<\/p>\n\nCells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased from PromoCell,\u00a0maintained in DMEM with 10% FBS, and used in passage 8.<\/p>\nExperimental groups with VEGF-A concentrations: Group1 (no VEGFA), Group2 (1 ng\/ml VEGFA), Group3 (10 ng\/ml VEGFA), Group4 (20 ng\/ml VEGFA), Group5 (50 ng\/ml VEGFA)<\/p>\nWe used VEGF-A from R&D Systems, Minneapolis, MN for the stimulation. Media change and VEGF-A stimulation were done on days 0,2,4,6. Assay fixation was on day 7.<\/p>\nStaining: DAPI staining for nuclei, phalloidin staining for F-actin.<\/p>\nDOI: 10.5281\/zenodo.7240927.svg<\/p>\nSoftware<\/h1>\nMedicDeepLabv3Plus<\/h2>\nResearchers: Juan Miguel Valverde<\/span><\/strong>, Riccardo De Feo<\/span>, Artem Shatillo<\/span>, Jussi Tohka<\/span><\/p>\nOfficial repository of MedicDeepLabv3+<\/a><\/p>\n<\/div>\nMedicDeepLabv3+ is a convolutional neural network based on DeepLabv3+ implemented in Python and Pytorch to extract the brain mask and the contralateral hemisphere of rodent MRI brain scans with lesions. The code of MedicDeepLabv3+ is simplified to make it readable and accessible to a wide audience.<\/p>\nDOI: 10.5281\/zenodo.4009212.svg<\/p>\n <\/p>\n","protected":false},"excerpt":{"rendered":"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]<\/p>\n","protected":false},"author":162,"featured_media":0,"parent":21,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-646","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\nDatasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"og:description\" content=\"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:site_name\" content=\"Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"article:modified_time\" content=\"2023-03-07T13:26:19+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"name\":\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"isPartOf\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\"},\"datePublished\":\"2023-03-07T13:25:46+00:00\",\"dateModified\":\"2023-03-07T13:26:19+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"GenomMed home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Datasets and Software\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/\",\"name\":\"Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/sites.uef.fi\/genommed\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","og_locale":"en_US","og_type":"article","og_title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","og_description":"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]","og_url":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","og_site_name":"Genetics and Mechanisms in Translational Medicine Doctoral programme","article_modified_time":"2023-03-07T13:26:19+00:00","twitter_card":"summary_large_image","twitter_misc":{"Est. reading time":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","url":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","name":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","isPartOf":{"@id":"https:\/\/sites.uef.fi\/genommed\/#website"},"datePublished":"2023-03-07T13:25:46+00:00","dateModified":"2023-03-07T13:26:19+00:00","breadcrumb":{"@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/sites.uef.fi\/genommed\/"},{"@type":"ListItem","position":2,"name":"GenomMed home","item":"https:\/\/sites.uef.fi\/genommed\/"},{"@type":"ListItem","position":3,"name":"Datasets and Software"}]},{"@type":"WebSite","@id":"https:\/\/sites.uef.fi\/genommed\/#website","url":"https:\/\/sites.uef.fi\/genommed\/","name":"Genetics and Mechanisms in Translational Medicine Doctoral programme","description":"","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/sites.uef.fi\/genommed\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-US"}]}},"_links":{"self":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/users\/162"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/comments?post=646"}],"version-history":[{"count":2,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646\/revisions"}],"predecessor-version":[{"id":652,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/646\/revisions\/652"}],"up":[{"embeddable":true,"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/pages\/21"}],"wp:attachment":[{"href":"https:\/\/sites.uef.fi\/genommed\/wp-json\/wp\/v2\/media?parent=646"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}](\"https:\/\/zenodo.org\/badge\/DOI\/10.5281\/zenodo.7240927.svg\"){kind=link}
![Official repository of MedicDeepLabv3+<\/a><\/p>\n<\/div>\nMedicDeepLabv3+ is a convolutional neural network based on DeepLabv3+ implemented in Python and Pytorch to extract the brain mask and the contralateral hemisphere of rodent MRI brain scans with lesions. The code of MedicDeepLabv3+ is simplified to make it readable and accessible to a wide audience.<\/p>\nDOI: 10.5281\/zenodo.4009212.svg<\/p>\n <\/p>\n","protected":false},"excerpt":{"rendered":"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]<\/p>\n","protected":false},"author":162,"featured_media":0,"parent":21,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-646","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\nDatasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"og:description\" content=\"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. Human lung pulmonary fibroblasts (hPFs) were purchased […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\" \/>\n<meta property=\"og:site_name\" content=\"Genetics and Mechanisms in Translational Medicine Doctoral programme\" \/>\n<meta property=\"article:modified_time\" content=\"2023-03-07T13:26:19+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\",\"name\":\"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"isPartOf\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\"},\"datePublished\":\"2023-03-07T13:25:46+00:00\",\"dateModified\":\"2023-03-07T13:26:19+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"GenomMed home\",\"item\":\"https:\/\/sites.uef.fi\/genommed\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Datasets and Software\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/sites.uef.fi\/genommed\/#website\",\"url\":\"https:\/\/sites.uef.fi\/genommed\/\",\"name\":\"Genetics and Mechanisms in Translational Medicine Doctoral programme\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/sites.uef.fi\/genommed\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/sites.uef.fi\/genommed\/front-page\/datasets-and-software\/","og_locale":"en_US","og_type":"article","og_title":"Datasets and Software - Genetics and Mechanisms in Translational Medicine Doctoral programme","og_description":"Dataset Fibrin bead assay with VEGF-A stimulation Researchers: Mustafa Beter, Johanna Laakkonen, Seppo Yl\u00e4-Herttuala Confocal microscopy images of fibrin bead assay. Cells: Human umbilical vein endothelial cells (HUVECs) were isolated,\u00a0maintained in PromoCell Endothelial Cell Growth Medium (Heidelberg, Germany) with 1X endothelial growth kit addition, and used\u00a0in passage 2. 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